BMC Genomics

Table 2 Gene content in the genomes of the newly sequenced Xanthomonas campestris strains

From: Genomics and transcriptomics of Xanthomonas campestris species challenge the concept of core type III effectome

Strain	Pathovar	All genes	mRNA^a	rRNA^b	tRNA^c	Other ncRNA^d
CFBP 5825R	NP^e	4698	4510	3	54	131
CFBP 1606R	incanae	4574	4393	3	53	125
CFBP 2527R	incanae	4588	4404	3	54	127
CFBP 5828R	raphani	4447	4262	3	53	130
CFBP 5828R + RNAseq^f	raphani	4610	4279	3	53	275

^aProtein coding sequence
^bRibosomal RNA
^cTransfer RNA
^dNon coding RNA
^eNon-pathogenic; received as pv. barbareae
^fGenes predicted using both genomic and RNA sequencing (RNAseq) datasets

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ISSN: 1471-2164

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