Fig. 4
From: Cascade: an RNA-seq visualization tool for cancer genomics
Screenshot of CNV and splicing representation. Copy number variations (CNVs) are represented in the Cascade display as gene nodes raised or lowered from the plane of the pathway by a height which is proportional to the value of the average CNV value within the samples set. Copy number gains are shown as nodes onto top of red cones, which copy losses as shown as genes on green cones. Alternative splicing frequency within a sample cohort is represented by a ring around the node which is coloured according to the frequency thresholds defined by the user