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Table 1 General genome features of Sphingopyxis granuli strain TFA

From: Genomic analysis of the nitrate-respiring Sphingopyxis granuli (formerly Sphingomonas macrogoltabida) strain TFA

Characteristic

Value

Genome size (bp)

4,679,853

GC Content (%)

66.2

Coding sequence

4,187,393

Number of predicted genes

4250

Number of predicted protein-coding genes

4190

 Predicted proteins with description

3502

 Predicted proteins uncharacterized

688

Number of RNA genes

60

 tRNA genes

46

 rRNA genes

3

 ncRNA a

11

Number of protein coding genes in Sphingopyxis core

2294

Number of exclusive protein coding genes

479

Other features

 Free plasmids

n.d.

 Selenocysteine tRNA and selenoproteins

n.d.

  1. ancRNAs predicted by Infernal software. n.d. non-detected