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Table 3 Human genes absent from CyCMV Mauritius

From: A novel strain of cynomolgus macaque cytomegalovirus: implications for host-virus co-evolution

Gene

CyCMV Ottawa/RhCMV 68.1 Homologue

Functiona

Effect of deletion on viral growth kineticsb

Family

RL2

−/−

-

no effect

 

RL3

−/−

-

no data

 

RL4

−/−

-

no effect

 

RL5

−/−

-

no data

RL11

RL6

−/−

-

no effect

RL11

RL7

−/−

-

no data

 

RL8

−/−

-

no data

 

RL9

−/−

-

no effect

 

RL10

−/−

-

no effect

RL11

RL11

cyRL11/rh05

IgG Fc-binding glycoprotein

no effect

RL11

RL12

−/−

Putative membrane glycoprotein

no effect

RL11

RL13

−/−

Putative membrane glycoprotein

no effect

 

RL14

−/−

-

no data

 

UL1

−/−

-

no data

RL11

UL2

−/−

-

modest effect

RL11

UL3

−/−

-

no effect

 

UL4

−/−

-

no effect

RL11

UL5

−/−

-

no effect

RL11

UL8

−/−

-

no effect

RL11

UL10

−/−

Temperance factor in retinal tissueb

no effect

RL11

UL12

−/−

-

modest effect

 

UL15

−/−

-

no effect

 

UL16

−/−

Membrane glycoportein involved in inhibiting Natural Killer cell cytotoxicity

no effect

 

UL17

-/rh35

7-transmembrane glycoprotein

no effect

 

UL18

−/−

MHCI homologue putative membrane protein

no effect

UL18

UL22

−/−

-

no data

 

UL39

−/−

-

no effect

 

UL40

-/rh67

Membrane glycoptrotein

no data

 

UL58

−/−

-

no data

 

UL59

−/−

-

no effect

 

UL60

−/−

-

required for replication

 

UL61

−/−

-

no data

 

UL62

−/−

-

no effect

 

UL63

−/−

-

no data

 

UL64

−/−

-

no effect

 

UL65

−/−

-

modest effect

 

UL66

−/−

-

no data

 

UL67

−/−

-

no effect

 

UL68

−/−

-

no data

 

UL80.5

-/rh109.1

Capsid Scaffold Protein

no data

Core

UL81

−/−

-

no data

 

UL101

−/−

-

required for replication

 

UL106

−/−

-

no data

 

UL107

−/−

-

no data

 

UL108

−/−

-

no data

 

UL109

−/−

-

modest effect

 

UL110

−/−

-

no effect

 

UL118

-/rh151

-

no effect

 

UL124

-/rh156.2

Membrane glycoprotein latent protein

no data

 

UL125

−/−

-

variable critical effect

 

UL127

−/−

-

no data

 

UL129

−/−

-

no effect

 

UL143

−/−

Inhibits Natural Killer cell cytotoxicity

modest effect

 

UL142

−/−

Putative membrane protein

no data

 

UL139

−/−

Putative membrane glycoprotein

no data

 

UL138

−/−

Putative membrane protein

no data

 

UL137

−/−

-

no data

 

UL136

−/−

Putative membrane protein

no data

 

UL135

−/−

Putative secreted protein

no data

 

UL134

−/−

-

no data

 

UL133

−/−

Putative membrane protein

no data

 

UL148A

−/−

Putative membrane protein

no data

 

UL148B

−/−

Putative membrane protein

no data

 

UL148C

−/−

Putative membrane protein

no data

 

UL148D

−/−

Putative membrane protein

no data

 

UL149

−/−

 

no data

 

UL150

−/−

Putative Secreted Protein

no data

 

IRS1

−/−

Immediate early membrane protein & transcriptional activator/blocks protein kinase R mediated repression of translation

no data

 

US4

−/−

-

no effect

US22

US5

-/rh183

-

no data

 

US6

-/rh185

Putative membrane glycoprotein/Inhibits TAP mediated ER peptide transport

no data

 

US7

−/−

Membrane glycoprotein

no effect

US6

US8

/-rh187

MHCI binding Membrane glycoprotein

no effect

US6

US9

−/−

Membrane glycoprotein involved in cell to cell spread

no effect

US6

US10

−/−

membrane glycoprotein/Delays trafficking of MHCI

no effect

US6

US15

−/−

Putative multiple transmembrane protein

no effect

US6

US16

−/−

Temperance factor and Putative multiple transmembrane protein

no effect

US12

US25

−/−

-

no effect

US12

US27

−/−

Virion Envelope Glycoprotein/Potentiates CXCR4 receptorc

no effect

 

US33

−/−

-

no effect

GPCR

US34

−/−

Putative secreted protein

no effect

 

US34A

−/−

Putative membrane protein

no effect

 
  1. Footnotes:
  2. aFunction annotated based on studies of HCMV [52] unless otherwise indicated
  3. bBased on study of gene mutation in HCMV Towne [51]
  4. cBased on study of US27 in HCMV AD169 [53]