From: Transcriptome dynamics in the asexual cycle of the chordate Botryllus schlosseri
Gene | References | GenBank IDs (mRNA) | ISH probe (nucleotides) | Best hits (scaffold IDs) | stringency conditions: expression level threshold: 0 for p-value: 0.05 | ||
---|---|---|---|---|---|---|---|
Filter for minimum clues: 3 | |||||||
 |  |  |  |  | pre-TO vs MC | TO vs pre-TO | MC vs TO |
CA1 | Degasperi et al., 2009 [34] | FN178501.1 | NP | g29085.t1 | Â | Â | Â |
g8425.t1 | Â | Â | Â | ||||
g2746.t1 | Â | Â | Â | ||||
MA2 | FN178503.1 | 1-1376 | g27308.t1 |  |  | ↓ | |
g10356.t1 | Â | Â | Â | ||||
TnT-c | FN178505.1 | 100-1103 | g6900.t1 | Â | Â | Â | |
FoxI | Gasparini et al., 2013 [36] | HE681860.1 | 1-1167 | TCONS_00000859 | Â | Â | Â |
TCONS_00002496 | Â | Â | Â | ||||
Six1/2 | HE681849.1 | 1-724 | g4758.t1 |  |  | ↑ | |
Six3/6 | HE681854 | 1-1106 | g29556.t1 | Â | Â | Â | |
Eya | HE681857.1 | 1-517 | g23845.t1 | Â | Â | Â | |
g5457.t1.1 | Â | Â | Â | ||||
Cdh | Rosner et al., 2007 [37] | U61755.1 | 3867–4316 | g54100.t1 | ↑ |  | ↓ |
RBL -3 | Franchi et al., 2011 [35] | EU051318.1 | 19-456 | g1465.t1 | Â | Â | Â |