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Fig. 5 | BMC Genomics

Fig. 5

From: Automated detection of ncRNAs in the draft genome sequence of a colonial tunicate: the carpet sea squirt Didemnum vexillum

Fig. 5

Evolution of snRNA, snoRNA, and miRNA families. A the terminal branches of the phylogenetic tree we report the number of families annotated by this study. At the interior nodes the inferred number of families present is shown in black. Gain/loss events are displayed along the edges with green and red numbers, respectively. Abbreviations for species names: Prot: Protostomia, Cel: C. elegans, Bfl: B. floridae, Odi: O. dioica, Bsc: B. schlosseri, Dvex: D. vexillum, Cin: C. intestinalis, Csa: C. savignyi, Pma: P. marinus, Dre: D. rerio, Lch: L. chalumnae, Xtr: X. tropicalis and Aca: A. carolinensis a snRNAs. The snRNA families included were: 7SK, Rnase MRP, Rnase P, SRP RNA, U1, U2, U4, U5, U6, U11, U12, U4atac, U6atac, vault RNA, Y RNA and SmY. b snoRNAs. c miRNAs. d Venn diagram for shared miRNAs

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BMC Genomics

ISSN: 1471-2164

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