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Fig. 3 | BMC Genomics

Fig. 3

From: Design and application of a target capture sequencing of exons and conserved non-coding sequences for the rat

Fig. 3

Variants identified by TargetEC. a Numbers of homozygous SNVs identified in the WTC/Kyo and PVG/Seac strains. Only SNVs in regions with a coverage depth of ≥10 were used. b Proportions of the number of SNVs in each class of target regions in the WTC/Kyo strain: CDS, UTR, CNS, and others. The proportions are compared with the region lengths. c The relationship between the phastCons conservation score and SNV density in the WTC/Kyo strain. SNV density was calculated as the number of SNVs divided by the lengths of regions with a certain phastCons score range (binned for every 0.05 interval)

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BMC Genomics

ISSN: 1471-2164

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