Table 1 Summary statistics for sequencing and mapping
Strain | Total reads | Read length | Mapped reads (%) | After removing duplicated reads (%) | Reads on target (%) | Average target depth | % target with coverage depth of ≥10× |
|---|---|---|---|---|---|---|---|
WTC/Kyo | 149,260,414 | 251 | 149,076,094 (99.9) | 140,578,240 (94.2) | 117,852,971 (79.0) | 108.0 | 99.3 |
WTC-swh/Kyo | 149,679,520 | 251 | 149,510,020 (99.9) | 140,569,239 (93.9) | 118,321,570 (79.0) | 107.6 | 99.3 |
PVG/Seac | 328,315,192 | 101 | 325,289,595 (99.1) | 279,768,743 (85.2) | 257,155,712 (78.3) | 120.4 | 99.4 |
KFRS4/Kyo | 335,799,700 | 101 | 333,078,486 (99.2) | 289,224,244 (86.1) | 264,672,454 (78.8) | 125.3 | 99.4 |