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Fig. 6 | BMC Genomics

Fig. 6

From: Genome analysis and avirulence gene cloning using a high-density RADseq linkage map of the flax rust fungus, Melampsora lini

Fig. 6

Identification of an AvrL2 gene family. a Physical and genetic maps of the region surrounding AvrL2. The positions of AvrL2 family members are shown in red. Genetic markers that were not used in CH5 genetic map construction are shown in italics. b AvrL2 family members found in avirulent (AVR) and virulent (VIR) CH5 F2 individuals. The percentage DNA identity between coding regions is shown along with the predicted protein size in amino acids (aa). c Alignment of introns found in AvrL2 family genes. Polymorphic nucleotides are shaded blue. d Alignment of predicted AvrL2 family proteins. Predicted signal peptides are shaded green. Identical amino acids are marked by ‘*’, conservative amino acid substitutions are marked by ‘:’ and semi-conservative amino acid substitutions are marked by ‘.’. Predicted regions of intrinsic disorder are shown in red

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BMC Genomics

ISSN: 1471-2164

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