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Table 2 Percentages of SSRs found using ISB annotation or TRF in the Galgal4 model

From: Deep landscape update of dispersed and tandem repeats in the genome model of the red jungle fowl, Gallus gallus, using a series of de novo investigating tools

Sequence type

RM

TRF

Increase factor

Assembled in chromosomes

1.54

3.73

2.42

Unassembled

5.67

12.24

2.16

Total in Galgal4

1.73

4.08

2.36

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BMC Genomics

ISSN: 1471-2164

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