Table 2 SNPs coverage on the GBS genotypic matrix with 50 % coverage, indicating for each chromosome (Chr = chromosome), the number of SNPs, the length (in cM) and the largest gap without markers (cM)
From: Ascertainment bias from imputation methods evaluation in wheat
Chr | SNPs number | Length (cM) | Largest gap (cM) | Median (cM) |
|---|---|---|---|---|
1A | 821 | 266 | 33 | 0 |
1B | 1282 | 294 | 22 | 0 |
1D | 255 | 242 | 25 | 0 |
2A | 900 | 242 | 22 | 0 |
2B | 1746 | 266 | 38 | 0 |
2D | 327 | 182 | 27 | 0 |
3A | 929 | 329 | 28 | 0 |
3B | 1912 | 290 | 30 | 0 |
3D | 270 | 287 | 29 | 0 |
4A | 907 | 234 | 28 | 0 |
4B | 610 | 177 | 31 | 0 |
4D | 74 | 130 | 45 | 0 |
5A | 1023 | 232 | 26 | 0 |
5B | 1270 | 316 | 22 | 0 |
5D | 197 | 306 | 29 | 0 |
6A | 883 | 237 | 34 | 0 |
6B | 1302 | 232 | 25 | 0 |
6D | 243 | 276 | 28 | 0 |
7A | 1456 | 323 | 24 | 0 |
7B | 1660 | 263 | 40 | 0 |
7D | 270 | 337 | 45 | 0 |