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Table 2 Differentially expressed genes between hybrid and the parents in the spikelet and floret differentiation stages

From: Transcriptome profiling and comparison of maize ear heterosis during the spikelet and floret differentiation stages

Comparison Group

UP

Down

Total

Gene number

Percentage

Gene number

Percentage

Gene number

Percentage

CL11-S vs NG5-S

6280

27.26%

6270

27.22%

12550

54.48%

HYB-S vs CL11-S

4310

18.71%

3980

17.28%

8290

35.98%

HYB-S vs NG5- S

2346

10.18%

1963

8.52%

4309

18.70%

CL11-F vs NG5-F

4985

21.64%

5135

22.29%

10120

43.93%

HYB-F vs CL11-F

4048

17.57%

3267

14.18%

7315

31.75%

HYB-F vs NG5-F

1475

6.40%

1221

5.30%

2696

11.70%

CLl1-S vs CL11-F

608

2.64%

366

1.59%

974

4.23%

NG5-S vs NG5-F

152

0.66%

288

1.25%

440

1.91%

HYB-S vs HYB-F

133

0.58%

352

1.53%

485

2.11%

  1. Total analyzed genes: 23038; Deseq P value with padj < 0.05; S denotes the spikelet differentiation stage; F denotes the floret differentiation stage