Table 4 Annotation of Trinity transcripts
From: Improved annotation with de novo transcriptome assembly in four social amoeba species
D. discoideum | P. pallidum | D. fasciculatum | D. lacteum | |
|---|---|---|---|---|
Annotated | 28,698 | 29,405 | 32,875 | 28,463 |
Aligned to reference | ||||
Known | 672 | 170 | 3,028 | 240 |
Novel | 1,277 | 4,505 | 2,978 | 2,040 |
Artefact | 98 | 376 | 288 | 134 |
Not aligned to reference | ||||
Known | 14 | 82 | 525 | 945 |
Novel | 69 | 26 | 6,559 | 6,465 |
Artefact | 431 | 81 | 208 | 366 |