B31-GB genome (length) | Nanopore contig name | Nanopore contig length | Identity with B31-GB | Id % | Gaps | Gaps % | Start query (subject) | Stop query (subject) | SNPs NP MEGA | % | SNPs PB MEGA | % |
---|---|---|---|---|---|---|---|---|---|---|---|---|
main (910,724) | 241244 | 878,078 | 659,561/683,765 | 96 | 24,016/683,765 | 3 | 205,813 (213,067) | 865,577 (897,715 | nd | nd | Â | Â |
cp26 (26,498) | 241245 | 46,144 | 25,597/26,496 | 97 | 8,951/26,496 | 3 | 13,432 (1) | 39,032 (26,496) | 15/26,498 | 0.05 | 4/26,498 | 0.01 |
lp54 (53,657) | 241246 | 51,693 | 51,381/53,655 | 96 | 2,222/53,655 | 4 | 199 (53,651) | 51,635 (1) | 199/53,651 | 0.2 | 7/53,915 | 0.01 |
lp56 (52,971) | 241248 | 51,105 | 50,156/52,909 | 95 | 2,152/52,909 | 4 | 1 (65) | 51,105 (52,578) | 837/53,318 | 1.6 | 7/53,318 | 0.01 |
lp38 (38,829) | 241249 | 37,824 | 37,356/38,823 | 96 | 1,429/38,823 | 3 | 54 (38,821) | 37,454 (6) | 176/38,821 | 0.45 | 1/38,821 | 0.002 |
cp32-1 (30,750) | 241247 | 67,311 | 20,520/21,493 | 95 | 663/21,493 | 3 | 36,733 (1) | 57,597 (21,458) | 2694/60,973b | 4.4 | Â | Â |
lp17 (16,821) | ch_216a | 16,238 | 16,067/16,821 | 96 | 751/16,821 | 4 | 42 (1) | 16,111 (16,821) | 80/16,989 | 0.47 | 0/16,989 | 0.0 |
lp28-1 (28,155) | ch_17a | 15,787 | 15,638/16,873 | 93 | 1,117/16,873 | 6 | 1 (1866) | 15,785 (18,709) | 1911/19,082 | 10.0 | 171/21,885 | 0.78 |
lp36 (36,849) | ch_474a | 34,829 | 34,690/36,856 | 94 | 2,094/36,856 | 5 | 1 (8) | 34,777 (36,848) | 281/36,856 | 0.7 | 0/36,856 | 0.0 |
cp32-3 (30,223) | ch_176a | 30,596 | 23,314/24,600 | 95 | 1,195/24,600 | 4 | 7187 (5629) | 30,596 (30,223) | 286/31,974 | 0.9 | 2/30,223 | 0.006 |
cp32-4 (30,299) | ch_152a | 22,112 | 21,907/23,209 | 94 | 1,105/23,209 | 4 | 1 (4046) | 22,111 (27,247) | 339/27,247 | 1.2 | 3/27,247 | 0.01 |
cp32-9 (30,651) | ch_212a | 28,699 | 17,790/19,416 | 92 | 1,325/19,416 | 6 | 1 (11,245) | 18,100 (30,651) | 491/30,651 | 2.7 | 2/30,651 | 0.006 |
cp32-2 | ch_293a | 18,058 | nd | nd | nd | nd | nd | nd | 181/18,058b | 1.0 | Â | Â |