Fig. 2
From: Mining sequence variations in representative polyploid sugarcane germplasm accessions
The number of variants called in the 14 sugarcane germplasm accessions. a Venn diagram showing overlapping SNPs among five genome reference-based callers, Tassel, Stacks, Samtools, GATK, and Freebayes. b Percentage of specific SNPs and concordant SNPs of the total SNPs called by five genome reference-based callers, Tassel, Stacks, Samtools, GATK, and Freebayes. c Venn diagram showing overlapping short insertions or deletions (InDels) among three reference-based callers, Samtools, GATK, and Freebayes