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Table 2 GO-term-enriched tables of AtLBR-2-dependent up-regulated 65 genes

From: Transcriptome analysis reveals key roles of AtLBR-2 in LPS-induced defense responses in plants

CC GO term

%

 Endomembrane system

27.1

 Membrane

17.1

 Intercellular part

14.3

 Membrane-bound organelle

11.4

 Intercellular organelle

11.4

 External encapsulation structure

8.6

 Apoplast

4.3

 Membrane part

1.4

 Intercellular organelle part

1.4

 Organelle membrane

1.4

MF GO term

%

 Catalytic activety

44.1

 Binding

35.3

 Transporter activety

11.8

 Electron carrier activety

5.9

 Structual molecule activety

1.5

BP GO term

%

 Response to stress*

12.0

 Cellular metabolic process

10.6

 Response to chemical stimulus*

9.9

 Response to biotic stimulus*

9.2

 Response to other organism*

9.1

 Primary metabolic process

6.3

 Transport

5.6

 Response to endogeneous stimulus*

4.2

 Secondary metabolic process

4.2

 Biosynthetic process

4.2

 Macromolecule metabolic process

3.5

 Immune response*

2.8

 Nitrogen compound metabolic process

2.8

 Response to abiotic stimulus*

2.1

 Regulation of biological process

2.1

 Transmembrane transport

2.1

 Catabolic process

2.1

 Small molecule metabolic process

1.4

 Oxidation-reduction process

0.7

 Aging

0.7

 Establishment of localization in cell

0.7

 Multicallular organism reproduction process

0.7

 Cell wall organization or biogengesis

0.7

 Cellular response to stimulus*

0.7

 Cell death

0.7

  1. The 65 AtLBR-2-dependent up-regulated genes were classified by functional categories under the following GO terms: CC (level 2), MF (level 1), and BP (level 2) using the VirtualPlant 1.3 web service. BP GO terms related to stress and stimulus are indicated by asterisks