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Table 3 Alignment of RNA-seq data from the human and mouse universal reference RNA

From: Computational approach to discriminate human and mouse sequences in patient-derived tumour xenografts

Sample

Replicate

HGR

ICRG

Alignment efficiency (%)

Alignment efficiency (%)

Reads mapped to the human genome (%)

Reads mapped to the mouse genome (%)

Human universal reference RNA

a

79.22

79.29

99.82

0.18

Human universal reference RNA

b

78.92

78.92

99.83

0.17

Human universal reference RNA

c

78.99

78.99

99.84

0.16

Mouse universal reference RNA

a

5.16

5.16

1.08

98.92

Mouse universal reference RNA

b

5.10

5.10

1.08

98.92

Mouse universal reference RNA

c

5.18

5.18

1.23

98.77