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Fig. 5 | BMC Genomics

Fig. 5

From: A manually annotated Actinidia chinensis var. chinensis (kiwifruit) genome highlights the challenges associated with draft genomes and gene prediction in plants

Fig. 5

Phylogenetic alignment of alignable protein sequences from EXPANSIN and ACC SYNTHASE proteins. Proteins in red are reference Arabidopsis proteins; blue and purple are published Actinidia chinensis protein sequences (blue are correctly annotated published unnamed ‘Hongyang’ proteins represented by gene models, purple models are partially represented); black are models are unannotated in the 2 published ‘Hongyang’ protein sets. Each tree is rooted with a basal species. Bootstrap values of 1000 iterations are given. A. EXPANSIN proteins; vertical line represents EXPANSIN proteins (Grey) EXPANSIN LIKE B proteins (Yellow) and EXPANSIN LIKE A proteins (blue). Rooted with DdEXP2 (NCBI # gi|74,854,151) B. ACC SYNTASE Proteins. Rooted with PpACL1 (NCBI# EDQ51432.1)

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BMC Genomics

ISSN: 1471-2164

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