Table 3 List of QTL detected for the ultimate pH of pectoralis major (PM-pHu) and sartorius (SART-pHu) muscles
Name | chr | marker | Positiona | Trait | BF Statisticsb | Corresponding selection signatures |
|---|---|---|---|---|---|---|
PM-1a | 1 | GGaluGA008928 | 24,859,232 | PM-pHu | 25,8 (3,5) | hapFLK-1c |
SART-1a | 1 | Gga_rs13840996 | 25,657,556 | SART-pHu | 22,6 (7,2) | hapFLK-1c |
SART-1a | 1 | Gga_rs14801623 | 25,685,185 | SART-pHu | 39,8 (8,0) | hapFLK-1c |
PM-1a | 1 | Gga_rs15214395 | 25,810,165 | PM-pHu | 47,6 (23,4) | hapFLK-1c |
SART-1a | 1 | Gga_rs13841091 | 25,825,380 | SART-pHu | 26,6 (7,1) | hapFLK-1c |
SART-1a | 1 | Gga_rs14801760 | 25,851,776 | SART-pHu | 25,1 (7,0) | hapFLK-1c |
PM-1a | 1 | Gga_rs14802541 | 26,664,752 | PM-pHu | 36,6 (6,3) | hapFLK-1c |
PM-1a | 1 | Gga_rs13842050 | 26,895,425 | PM-pHu | 300,2 (23,7) | hapFLK-1c |
PM-1b | 1 | GGaluGA012178 | 35,189,134 | PM-pHu | 33,6 (5,0) | – |
PM-1c | 1 | GGaluGA027506 | 80,195,898 | PM-pHu | 24,4 (33,7) | hapFLK-1e |
SART-1b | 1 | Gga_rs13583913 | 82,528,289 | SART-pHu | 41,5 (15,5) | hapFLK-1e |
SART-1c | 1 | GGaluGA031114 | 88,589,870 | SART-pHu | 22,3 (20,2) | – |
SART-1c | 1 | Gga_rs14856430 | 88,742,249 | SART-pHu | 50,3 (24,4) | – |
SART-1d | 1 | Gga_rs13920866 | 109,502,008 | SART-pHu | 30,2 (20,2) | – |
PM-2a | 2 | Gga_rs14135370 | 8,052,991 | PM-pHu | 107,0 (27,7) | hapFLK-2a |
PM-2a | 2 | Gga_rs14135839 | 8,512,020 | PM-pHu | 25,2 (18,4) | hapFLK-2a |
PM-2a | 2 | GGaluGA132849 | 8,557,078 | PM-pHu | 44,9 (16,6) | hapFLK-2a |
PM-2b | 2 | Gga_rs13709509 | 66,672,738 | PM-pHu | 20,4 (18,2) | – |
PM-2c | 2 | Gga_rs15126247 | 88,786,601 | PM-pHu | 90,5 (25,8) | – |
PM-2d | 2 | Gga_rs16102256 | 110,593,876 | PM-pHu | 65,0 (34,8) | – |
SART-3a | 3 | Gga_rs14408993 | 105,711,393 | SART-pHu | 28,7 (12,6) | – |
SART-4a | 4 | Gga_rs16349591 | 1,914,424 | SART-pHu | 257,2 (211,7) | – |
SART-4a | 4 | GGaluGA241837 | 1,935,633 | SART-pHu | 134,7 (93,0) | – |
SART-4a | 4 | Gga_rs14419109 | 1,985,419 | SART-pHu | 30,5 (36,7) | – |
SART-4b | 4 | Gga_rs16407811 | 50,234,136 | SART-pHu | 23,4 (19,8) | – |
SART-4b | 4 | Gga_rs14467373 | 50,260,314 | SART-pHu | 23,2 (19,3) | – |
SART-4c | 4 | Gga_rs14480120 | 62,306,853 | SART-pHu | 24,1 (14,7) | – |
PM-4a | 4 | GGaluGA270819 | 90,110,928 | PM-pHu | 25,8 (5,8) | – |
PM-5a | 5 | GGaluGA274824 | 10,559,934 | PM-pHu | 21,2 (4,4) | hapFLK-5a |
PM-6a | 6 | Gga_rs13567905 | 16,876,982 | PM-pHu | 25,1 (9,9) | – |
PM-6b | 6 | Gga_rs16552220 | 20,899,730 | PM-pHu | 24,5 (6,0) | – |
PM-7a | 7 | GGaluGA308703 | 2,828,621 | PM-pHu | 34,6 (12,2) | – |
PM-7b | 7 | Gga_rs15860854 | 22,215,517 | PM-pHu | 22,0 (3,4) | – |
PM-8a | 8 | Gga_rs16631815 | 15,186,655 | PM-pHu | 21,5 (4,6) | – |
PM-8b | 8 | Gga_rs13681628 | 20,157,176 | PM-pHu | 24,1 (8,3) | FLK-8a |
PM-10a | 10 | Gga_rs14941507 | 967,702 | PM-pHu | 58,3 (18,0) | – |
PM-10a | 10 | Gga_rs14001087 | 986,341 | PM-pHu | 20,5 (8,8) | – |
PM-12a | 12 | Gga_rs14031079 | 1,528,565 | PM-pHu | 22,0 (8,0) | – |
PM-12b | 12 | GGaluGA083170 | 5,811,993 | PM-pHu | 67,4 (7,6) | – |
PM-12b | 12 | Gga_rs14035691 | 5,820,013 | PM-pHu | 88,1 (14,4) | – |
PM-12c | 12 | Gga_rs14049172 | 19,145,586 | PM-pHu | 26,5 (24,8) | hapFLK-12b |
PM-14a | 14 | Gga_rs14071447 | 3,274,074 | PM-pHu | 31,3 (8,2) | hapFLK-14a |
PM-14a | 14 | GGaluGA100179 | 3,387,115 | PM-pHu | 80,9 (16,6) | hapFLK-14a |
PM-16a | 16 | Gga_rs15026791 | 85,688 | PM-pHu | 34,6 (5,6) | – |
SART-20a | 20 | Gga_rs13633029 | 6,881,983 | SART-pHu | 41,2 (34,3) | – |
SART-20a | 20 | Gga_rs16167169 | 6,912,028 | SART-pHu | 35,6 (30,5) | – |
PM-20a | 20 | Gga_rs15174825 | 7,499,329 | PM-pHu | 24,0 (6,1) | – |
SART-21a | 21 | GGaluGA185204 | 5,971,877 | SART-pHu | 23,1 (21,6) | – |
PM-21a | 21 | Gga_rs14285841 | 6,045,175 | PM-pHu | 34,3 (14,4) | – |
PM-24a | 24 | Gga_rs13725186 | 6,092,691 | PM-pHu | 28,3 (24,4) | – |
PM-24a | 24 | Gga_rs16199693 | 6,153,126 | PM-pHu | 110,5 (24,4) | – |