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Table 1 Genome assembly and resequencing statistics

From: Analysis of Theileria orientalis draft genome sequences reveals potential species-level divergence of the Ikeda, Chitose and Buffeli genotypes

 

Robertson

Fish Creek

Goon Nure

Resequencing

 % reads mapped

96.9%

75.2%

78.0%

 % host DNA

0.072%

1.34%

0.069%

 Genome % ref. coverage (≥ 14×)

93.1%

74.4%

65.0%

 CDS % ref. coverage (≥ 14×)

96.5%

85.3%

78.3%

 Mean coverage depth

60.5 ×

43.5 ×

47.3 ×

Assembly

 # scaffolds

639

1557

6043

 N50

54,695

12,243

2646

 % GC

41.7%

39.3%

39.8%

 Predicted genes

3677

3604

4905

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BMC Genomics

ISSN: 1471-2164

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