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Table 9 Genes encoding cold-related proteins and anti-freezing proteins

From: Transcriptome analysis of chrysanthemum (Dendranthema grandiflorum) in response to low temperature stress

 

Gene ID

CP1 log2FC

CP1 regulated

CP2 log2FC

CP2 regulated

CP3 log2FC

CP3 regulated

Gene description

COR

c98333.graph_c1

–

–

4.07

up

4.47

up

putative cold-inducible protein

c97739.graph_c0

3.41

up

4.12

up

1.01

normal

cold-responsive protein

c99607.graph_c0

3.15

up

1.50

normal

3.31

up

Cold regulated gene 27

Cold shock proteins

c113528.graph_c0

2.83

up

2.73

up

0.01

normal

Cold shock protein 1

c94983.graph_c0

2.47

up

2.52

up

–

–

Cold shock protein 1

c99900.graph_c0

1.78

up

1.19

normal

0.37

normal

Cold shock domain-containing protein 3

AFPs

c99499.graph_c0

−1.26

normal

−2.87

down

−0.40

normal

beta-1,3-glucanase

c106137.graph_c0

0.85

normal

2.24

up

1.83

up

beta-1,3-glucanase

c101035.graph_c0

−2.55

down

−3.21

down

0.55

normal

chitinase 2-like

c82667.graph_c0

4.46

up

8.71

up

5.59

up

Thaumatin-like protein

c82207.graph_c0

−3.00

down

−1.66

normal

− 1.40

normal

Thaumatin-like protein

c107884.graph_c0

3.81

up

4.24

up

2.17

up

Thaumatin-like protein 1

c100473.graph_c1

−2.06

down

−1.79

normal

−0.31

normal

Thaumatin-like protein 1a

c97008.graph_c0

−3.44

down

−2.88

normal

−1.77

normal

Thaumatin-like protein 1

c96509.graph_c0

5.01

up

4.94

up

0.41

normal

polygalacturonase-inhibiting protein 4

c92070.graph_c0

7.56

up

8.54

up

–

–

Late embryogenesis abundant protein

c70366.graph_c0

5.37

up

5.74

up

0.05

normal

Late embryogenesis abundant protein

c58403.graph_c0

4.52

up

5.52

up

0.24

normal

Late embryogenesis abundant protein

c105364.graph_c0

1.15

normal

7.32

up

6.28

up

Late embryogenesis abundant protein

c114597.graph_c0

0.27

normal

1.97

up

2.85

up

Late embryogenesis abundant protein

c105750.graph_c0

2.76

up

2.12

normal

–

–

Late embryogenesis abundant protein

c100124.graph_c0

2.77

up

2.27

up

−0.52

normal

Late embryogenesis abundant protein

c110317.graph_c0

1.76

up

3.51

up

2.82

up

Late embryogenesis abundant protein

c94818.graph_c0

–

–

10.01

up

9.79

up

Late embryogenesis abundant protein

c78821.graph_c0

3.23

up

7.04

up

6.42

up

Late embryogenesis abundant protein

c102635.graph_c0

2.79

up

1.32

normal

−0.25

normal

Late embryogenesis abundant protein

c108163.graph_c0

3.73

up

4.59

up

2.68

up

Late embryogenesis abundant protein

c112429.graph_c0

1.99

up

3.51

up

2.45

up

Late embryogenesis abundant protein

c96108.graph_c0

1.09

normal

6.29

up

5.22

up

Late embryogenesis abundant protein

c114782.graph_c0

0.56

normal

1.61

normal

2.22

up

Late embryogenesis abundant protein

c108048.graph_c2

6.00

up

6.95

up

4.39

up

Late embryogenesis abundant protein

HSPs

c108834.graph_c0

−0.67

normal

4.29

up

3.33

up

Heat shock protein

c100907.graph_c0

0.01

normal

2.85

up

2.48

up

Heat shock protein

c120647.graph_c0

–

–

–

–

3.32

up

Heat shock protein 70

c104201.graph_c0

1.36

normal

2.04

up

−0.07

normal

Heat shock 70 kDa protein

c113668.graph_c0

−1.70

normal

−2.63

down

−0.89

normal

Heat shock 70 kDa protein

c97547.graph_c1

4.43

up

5.32

up

1.26

up

Heat shock 70 kDa protein

c86961.graph_c0

−0.15

normal

2.23

up

1.37

up

Heat shock cognate 70 kDa protein

c82373.graph_c0

–

–

3.05

up

–

–

Heat shock cognate 70 kDa protein

c108184.graph_c0

0.93

normal

2.56

up

1.01

normal

Heat shock cognate 70 kDa protein

c107360.graph_c0

0.74

normal

2.23

up

1.51

up

Heat shock factor protein HSF24

c98633.graph_c0

0.03

normal

1.28

normal

1.10

up

Heat shock cognate 70 kDa protein

c88835.graph_c0

−1.57

normal

2.03

up

1.90

up

Heat shock cognate 70 kDa protein

c114383.graph_c0

0.88

normal

3.24

up

2.47

up

Heat shock cognate 70 kDa protein

c114642.graph_c0

1.03

normal

2.34

up

−0.50

normal

Heat shock 70 kDa protein

c106065.graph_c0

2.03

up

2.13

normal

0.51

normal

Heat shock cognate protein

c112665.graph_c0

0.39

normal

3.17

up

1.91

up

Heat shock cognate 70 kDa protein

c95742.graph_c0

3.89

up

3.90

up

−0.30

normal

Heat shock 70 kDa protein

c111753.graph_c0

−0.02

normal

2.82

up

1.95

up

Heat shock cognate 70 kDa protein

c81956.graph_c0

−1.60

normal

−2.41

down

−1.84

down

Stromal 70 kDa heat shock-related protein

c97818.graph_c0

−2.43

down

−2.06

down

−0.93

normal

15.4 kDa class V heat shock protein

c91820.graph_c0

−1.35

normal

−2.66

down

−1.93

down

Stromal 70 kDa heat shock-related protein

c96991.graph_c0

−2.12

down

−2.42

down

−2.23

down

Stromal 70 kDa heat shock-related protein

c113713.graph_c1

−0.33

normal

−1.35

normal

1.65

up

22.7 kDa class IV heat shock protein

c102754.graph_c0

3.00

up

3.17

up

0.01

normal

Heat shock cognate protein 80

c112282.graph_c0

4.18

up

4.97

up

1.27

up

Heat shock cognate 70 kDa protein

c115107.graph_c2

3.11

up

3.26

up

0.16

normal

Heat shock protein 90–2

c102959.graph_c0

3.21

up

3.31

up

−0.06

normal

Heat shock 70 kDa protein

c112881.graph_c0

2.46

up

2.55

up

−0.20

normal

Stromal 70 kDa heat shock-related protein

c58792.graph_c0

–

–

4.51

up

3.93

up

Small heat shock protein

c115107.graph_c0

1.87

up

1.89

normal

0.12

normal

Heat shock protein 90–2

c109478.graph_c0

0.06

normal

2.11

up

1.02

normal

Heat shock cognate 70 kDa protein

c99010.graph_c0

−1.34

normal

−2.22

down

−0.64

normal

15.7 kDa heat shock protein