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Table 1 False positive and false negative values of SWGIS v2.0 calculated for different naïve chromosomes

From: EuGI: a novel resource for studying genomic islands to facilitate horizontal gene transfer detection in eukaryotes

 

False positive a

False negative

C. albicans NW_139454

16%

5.67%

C. albicans NW_139474

0%

7.73%

T. pseudonana NC_012068

0%

30.93%

T. pseudonana NC_012069

0%

30.41%

T. delbrueckii NC_016501

1%

16.49%

T. delbrueckii NC_016504

2%

21.13%

P. tricornutum NC_011690

11%

24.74%

P. tricornutum NC_011693

1%

29.90%

  1. aRandom chromosome fragments were moved from the other chromosome of the same organism (e.g. for NW_139454 random fragments were moved from NW_139474 to NW_139454 and vice versa for NW_139474)
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BMC Genomics

ISSN: 1471-2164

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