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Table 2 GO enrichment analysis of expression-level dominance genes in the resynthesized B. napus

From: Homoeolog expression bias and expression level dominance in resynthesized allopolyploid Brassica napus

Expression patterns

GO IDa

GO Name

FDR

ELD-A

GO:0006612

protein targeting to membrane

5.49E-20

GO:0010363

regulation of plant-type hypersensitive response

5.77E-19

GO:0043069

negative regulation of programmed cell death

1.79E-18

GO:0010200

response to chitin

2.91E-17

GO:0046686

response to cadmium ion

8.27E-17

ELD-C

GO:0046686

response to cadmium ion

1.86E-21

GO:0006626

protein targeting to mitochondrion

3.72E-21

GO:0006094

gluconeogenesis

1.44E-13

GO:0019288

isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway

9.97E-13

GO:0009853

photorespiration

7.10E-10

Transgressive up-regulation

GO:0046686

response to cadmium ion

2.49E-24

GO:0006096

glycolytic process

8.55E-18

GO:0006094

gluconeogenesis

8.99E-18

GO:0009409

response to cold

3.72E-17

GO:0009744

response to sucrose

7.62E-15

Transgressive down-regulation

–

–

–

Additivity

GO:0006499

N-terminal protein myristoylation

2.02E-09

GO:0015996

chlorophyll catabolic process

5.78E-07

GO:0080086

stamen filament development

1.66E-06

GO:0009651

response to salt stress

1.75E-05

GO:0042398

cellular modified amino acid biosynthetic process

2.33E-05

  1. aThe top 5 significantly enriched biological process terms for each type of expression patterns and all significantly enriched GO terms are listed in Additional file 2