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Table 2 Expression level of the juvenile hormone related genes during the pupariation in Bactrocera dorsalis

From: RNA-seq analysis of gene expression changes during pupariation in Bactrocera dorsalis (Hendel) (Diptera: Tephritidae)

Gene ID

WS-FPKM

LWS-FPKM

WPS-FPKM

WS vs LWS

WS vs WPS

Blast nr

juvenile hormone synthesis pathway

 LOC105226875

158.49

193.63

216.66

+

+

Acetoacetyl-CoA thiolase

 LOC105227740

11.83

6.01

5.89

− 1.03*

3-Hydroxy-3-methylglutaryl-CoA synthase

 LOC105226753

2.91

4.38

4.36

+

+

3-Hydroxy-3-methylglutaryl-CoA reductase

 LOC105233868

39.12

30.559

33.79

Mevalonate kinase

 LOC105230627

20.54

23.40

23.82

+

+

Phosphomevalonate kinase

 LOC105224988

14.42

12.11

11.58

Diphosphomevalonate decarboxylase

 LOC105230652

24.54

27.08

26.39

+

+

Farnesyl diphosphate synthase

 LOC105225547

70.82

27.06

24.24

−1.41*

−1.50*

Farnesol dehydrogenase

 LOC105228451

683.52

151.47

159.65

−2.16*

−2.01*

Farnesoic acid O-methyl transferase

 LOC105227166

18.26

3.77

4.05

−2.39*

−2.30*

Juvenile hormone acid O-methyltransferase

Juvenile hormone degradation pathway

 LOC105230544

15.22

2.97

2.07

−2.38*

− 2.87*

Juvenile hormone epoxide hydrolase

 LOC105226721

1517.31

230.58

104.88

−2.78*

−3.94*

Juvenile hormone diol kinase

 LOC105229968

0.99

0.15

0.034

−2.90*

−5.00*

Juvenile hormone esterase

Juvenile hormone signal transduction pathway

 LOC105228252

22.35

20.74

15.64

Methoprene-tolerant

 LOC105232250

26.87

18.75

14.51

Steroid receptor coactivator

 LOC105224804

23.21

15.81

14.51

Krüppel homolog 1

Juvenile hormone transporter pathway

 LOC105232271

423.59

2.15

2.09

−7.67*

−7.72*

Juvenile hormone binding protein

 LOC105234182

1134.50

7.68

4.28

−7.22*

−8.06*

Juvenile hormone binding protein

 LOC109579562

2.75

0.047

0

−6.86*

*

Juvenile hormone binding protein

 LOC105232270

2659.47

38.67

19.20

−6.13*

−7.11*

Juvenile hormone binding protein

 LOC105232273

2559.46

61.87

23.55

−5.37*

−6.76*

Juvenile hormone binding protein

 LOC105234180

19.13

0.63

1.57

−5.13*

−3.70*

Juvenile hormone binding protein

 LOC105232274

71.64

2.85

1.11

−4.67*

−6.01*

Juvenile hormone binding protein

 LOC105232427

143.97

7.50

3.81

−4.28*

−5.24*

Juvenile hormone binding protein

 LOC105226548

11.19

1.13

1.24

−3.40*

−3.22*

Juvenile hormone binding protein

 LOC109579964

951.84

145.71

84.49

−2.75*

−3.50*

Juvenile hormone binding protein

 LOC105226550

130.82

26.86

33.09

−2.29*

− 2.01*

Juvenile hormone binding protein

 LOC105226544

10.54

2.66

2.26

−2.04*

−2.31*

Juvenile hormone binding protein

 LOC105231611

10.53

3.77

3.38

−1.51*

−1.71*

Juvenile hormone binding protein

  1. The gene expression level was calculated by RPKM method. “+” represents up-regulation, and “-” represents down-regulation. Asterisks (*) indicate that the gene, whose expression level had more than two folds difference between two stages and False Discovery Rate (FDR) was less than 0.01