Comparative transcriptome among Euscaphis konishii Hayata tissues and analysis of genes involved in flavonoid biosynthesis and accumulation

Table 2 Summary of the assembly and annotation of the transcriptome

	Leaf	Branch	Capsule
Clean reads	91,768,881	100,363,012	100,124,694
Clean nucleotides(nt)	27,117,135,514	29,612,649,608	29,636,461,864
GC percentage (%)	45.13	45.62	45.10
Combined non-redundant unigene		85,342
Total length		76,261,599
Mean length		893.60
N50(nt)		1307
Nr		39,074 (45.79%)
GO		23,899 (28%)
COG		11,713 (13.72%)
Swiss-Prot		24,234 (28.40%)
KEGG		14,291 (16.75%)
All annotated		40,218 (47.13%)

ISSN: 1471-2164