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Table 1 Differentially methylated regions in opposite directions overlapping the same genes

From: Genome-wide methylation is modified by caloric restriction in Daphnia magna

Gene

Genomic Position

DMR

Length of DMR

Condition in CR

Number of sites

Corrected P-value

Exon

Strand

Dapma7bEVm000710

scaffold02569: 76199–79,126

76,729–77,106

377

hypo

16

0.0007575

2 of 8

+

Dapma7bEVm000710

scaffold02569: 76199–79,126

77,694–77,926

232

hyper

5

0.001717

6 of 8

+

Dapma7bEVm003762

scaffold01005: 527546–535,133

534,741–534,857

116

hypo

9

0.009821

2 of 6

–

Dapma7bEVm003762

scaffold01005: 527546–535,133

534,106–534,213

106

hyper

4

0.006839

4 of 6

–

  1. Gene: gene name, Genomic Position: gene coordinates, DMR: coordinates of the differentially methylated region, Length of DMR: length in bp, Number of site: number of methylated CpGs in region, Corrected P-value: FDR corrected p-value for that DMR from comb-p analysis, Exon: which exon of the gene DMR occurs in followed by number of exons for that gene, Strand: which genomic strand the gene occurs on