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Fig. 5 | BMC Genomics

Fig. 5

From: Differential expression analysis of Trichoderma virens RNA reveals a dynamic transcriptome during colonization of Zea mays roots

Fig. 5

Defense DEGs are repressed during Recognition and enhanced during Colonization. Stacked bar graph shows the number of DEGs with defense-related functions which are repressed or enhanced during Recognition (Rec.) and Colonization (Col.). DEGs are sorted into potential activities, including Antibiotic (production or breakdown of antibiotics), Antimicrobial (production of compounds known to inhibit microbial growth, but are not known antibiotics), Drug Metabolism (DEGs involved in the production or transport of drugs), Free Radical (catalases, peroxidases, glutathione metabolic genes, i.e. those which may protect the fungus from free radical attack), and Other (putative defense DEGs, see Additional file 3: Data File S2)

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BMC Genomics

ISSN: 1471-2164

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