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Table 4 Structural features of MeAQPs

From: Genome-wide comparison reveals divergence of cassava and rubber aquaporin family genes after the recent whole-genome duplication

Name

AA

MW (kDa)

pI

GRAVY

Ar/R selectivity filter

NPA motifs

Froger’s Position

H2

H5

LE1

LE2

Loop B

Loop E

P1

P2

P3

P4

P5

MePIP1;1

287

30.62

8.84

0.409

F

H

T

R

NPA

NPA

E

S

A

F

W

MePIP1;2

287

30.74

9.00

0.404

F

H

T

R

NPA

NPA

E

S

A

F

W

MePIP1;3

287

30.74

8.59

0.354

F

H

T

R

NPA

NPA

E

S

A

F

W

MePIP1;4

287

30.79

8.59

0.330

F

H

T

R

NPA

NPA

E

S

A

F

W

MePIP2;1

288

30.59

8.20

0.461

F

H

T

R

NPA

NPA

Q

S

A

F

W

MePIP2;2

288

30.71

6.99

0.438

F

H

T

R

NPA

NPA

Q

S

A

F

W

MePIP2;3

285

30.39

8.89

0.441

F

H

T

R

NPA

NPA

Q

S

A

F

W

MePIP2;4

286

30.42

9.08

0.480

F

H

T

R

NPA

NPA

Q

S

A

F

W

MePIP2;5

286

30.58

8.50

0.449

F

H

T

R

NPA

NPA

Q

S

A

F

W

MePIP2;6

286

30.55

6.99

0.451

F

H

T

R

NPA

NPA

Q

S

A

F

W

MePIP2;7

280

29.76

8.97

0.528

F

H

T

R

NPA

NPA

M

S

A

F

W

MePIP2;8

280

29.53

9.13

0.535

F

H

T

R

NPA

NPA

M

S

A

F

W

MePIP2;9

283

30.04

8.67

0.507

F

H

T

R

NPA

NPA

M

S

A

F

W

MePIP2;10

281

29.93

6.51

0.484

F

H

T

R

NPA

NPA

M

S

A

F

W

MeTIP1;1

252

25.97

5.55

0.730

H

I

A

V

NPA

NPA

T

S

A

Y

W

MeTIP1;2

252

25.97

6.12

0.742

H

I

A

V

NPA

NPA

T

S

A

Y

W

MeTIP1;3

252

25.85

5.19

0.825

H

I

A

V

NPA

NPA

T

S

A

Y

W

MeTIP1;4

252

25.83

5.13

0.801

H

I

A

V

NPA

NPA

T

S

A

Y

W

MeTIP1;5

252

25.69

4.79

0.846

H

I

A

V

NPA

NPA

T

S

A

Y

W

MeTIP1;6

252

25.66

4.94

0.893

H

I

A

V

NPA

NPA

T

S

A

Y

W

MeTIP2;1

248

25.14

6.15

0.925

H

I

G

R

NPA

NPA

T

S

A

Y

W

MeTIP2;2

250

25.41

5.09

0.873

H

I

G

R

NPA

NPA

T

S

A

Y

W

MeTIP2;3

250

25.26

5.66

0.916

H

I

G

R

NPA

NPA

T

S

A

Y

W

MeTIP3;1

258

27.45

7.14

0.567

H

I

A

R

NPA

NPA

T

A

A

Y

W

MeTIP3;2

258

27.32

6.75

0.640

H

I

A

R

NPA

NPA

T

A

A

Y

W

MeTIP4;1

247

25.79

6.12

0.835

H

I

A

R

NPA

NPA

T

A

A

Y

W

MeTIP5;1

252

25.92

7.79

0.749

N

V

G

C

NPA

NPA

T

A

A

Y

W

MeNIP1;1

279

29.94

8.87

0.427

W

V

A

R

NPA

NPA

F

S

A

Y

I

MeNIP1;2

285

30.52

8.90

0.448

W

V

A

R

NPA

NPA

F

S

A

Y

I

MeNIP2;1

288

30.40

9.37

0.430

G

S

G

R

NPA

NPA

L

T

A

Y

L

MeNIP3;1

283

30.46

8.43

0.478

W

A

A

R

NPA

NPA

F

S

A

Y

I

MeNIP3;2

273

28.87

4.96

0.639

W

M

A

R

NPA

NPA

F

S

A

Y

V

MeNIP3;3

274

29.31

6.51

0.659

W

I

A

R

NPA

NPA

L

S

A

Y

I

MeNIP5;1

298

31.03

8.64

0.388

A

I

G

R

NPS

NPV

F

T

A

Y

L

MeNIP6;1

306

31.59

7.71

0.344

T

I

A

R

NPS

NPV

F

T

A

Y

L

MeNIP7;1

299

31.86

8.45

0.551

A

V

G

R

NPA

NPA

Y

S

A

Y

I

MeXIP1;1

294

31.83

6.29

0.707

V

I

V

R

SPV

NPA

M

C

A

F

W

MeXIP2;1

304

32.04

8.60

0.634

I

T

V

R

NPV

NPA

V

C

A

F

W

MeXIP3;1

304

32.30

8.25

0.741

V

T

A

R

NPL

NPA

V

C

A

F

W

MeXIP3;2

307

32.64

6.37

0.788

V

T

A

R

NPL

NPA

V

C

A

F

W

MeSIP1;1

239

26.07

9.17

0.819

V

V

P

N

NPT

NPA

I

A

A

Y

W

MeSIP2;1

237

26.10

9.67

0.479

S

Q

G

S

NPL

NPA

F

V

A

Y

W

  1. (AA amino acid, ar/R aromatic/arginine, GRAVY grand average of hydropathicity, pI isoelectric point, kDa kilodalton, MW molecular weight, NPA Asn-Pro-Ala)