Table 1 Number of reads used for the alignment of RNA libraries to the E. pallida genome after rRNA removal. Number and percentage of reads uniquely mapped to the E. pallida genome. Ambiguous multi-mapped reads were discarded. WA = whole animal, AM = amputated animal (without pedal disc)
From: Transcriptional characterisation of the Exaiptasia pallida pedal disc
RNA Sample | Reads after rRNA removal | Uniquely mapped reads | Uniquely mapped reads (%) |
|---|---|---|---|
WA_1 | 67,328,068 | 57,367,421 | 85.21% |
WA_2 | 64,708,976 | 54,799,636 | 84.69% |
WA_3 | 59,036,216 | 49,247,662 | 83.42% |
WA_4 | 51,955,675 | 43,198,240 | 83.14% |
AM_1 | 40,391,198 | 31,786,172 | 78.70% |
AM_2 | 39,742,533 | 31,781,245 | 79.97% |
AM_3 | 40,466,242 | 32,114,316 | 79.36% |