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Table 2 For each site, sample size (“N”), mean expected heterozygosity over all loci (“He”) and standard deviation between loci, mean observed heterozygosity over all loci (“Ho”) and standard deviation between loci, mean allelic richness computed using a rarefaction approach over all loci (“Ar”), mean Fis over all loci (“Fis”), mean Fst over all loci (i.e. uniqueness at the site level; Fst = 1-HeSite/HeTotal)

From: Development of a large SNPs resource and a low-density SNP array for brown trout (Salmo trutta) population genetics

 

SNPs

Microsatellites

Site

N

Ho

He

Fis

Fst

Ar

Ho

He

Fis

Fst

Ar

BEA-Rau

27

0.18 ± 0.19

0.18 ± 0.18

0.011

0.070

1.58

0.44 ± 0.20

0.58 ± 0.25

0.226

0.04

4.42

PON-Rau

12

0.22 ± 0.23

0.21 ± 0.20

−0.038

0.030

1.66

0.67 ± 0.19

0.70 ± 0.17

0.027

0.022

5.63

THA-Bar

26

0.22 ± 0.23

0.22 ± 0.20

−0.025

0.022

1.65

0.65 ± 0.17

0.67 ± 0.18

0.015

0.017

5.85

THA-Tcc

30

0.19 ± 0.20

0.20 ± 0.18

0.028

0.027

1.69

0.61 ± 0.18

0.69 ± 0.17

0.107

0.019

6.18

THA-Usi

29

0.22 ± 0.22

0.21 ± 0.19

−0.023

0.025

1.67

0.68 ± 0.12

0.73 ± 0.16

0.057

0.019

6.79

THA-Vig

21

0.21 ± 0.21

0.22 ± 0.20

0.056

0.028

1.68

0.64 ± 0.17

0.72 ± 0.12

0.125

0.024

6.40

VIG-Tex

22

0.21 ± 0.21

0.21 ± 0.19

−0.004

0.031

1.66

0.69 ± 0.14

0.70 ± 0.15

0.033

0.02

5.91