Fig. 5

Principal coordinate analysis on the genetic distance between 362 inbred lines from an association panel estimated by a) 57,824 InDels and b) 28,143 SNPs. Colors represent the assignment of the inbred lines to the 5 genetic groups defined by admixture using pre-fixed Panzea SNPs from the 50 K Illumina array, when the probability of assignment to a group (membership) was greater than 60%. Inbred lines not assigned to a group were considered admixed and colored gray. The common names of maize accessions, typical of each genetic group, were used