Table 4 Differentially expressed genes candidates to be involved in female sexual development
Gene | Gene annotation | Sequence ID | Length (bp) | ORF | Fold change (ovary/testis) | FDR p-value | Mean TPM ovaries | Mean TPM testes | Gonad up-regulated |
|---|---|---|---|---|---|---|---|---|---|
Vg | Vitellogenin | TRINITY_DN69557_c0_g1_i2 | 7827 | complete | 8.53 | 9.16E-6 | 635.87 | 106.46 | yes |
Vgr | Vitellogenin receptor | TRINITY_DN75859_c0_g1_i3 | 5765 | complete | 61.24 | 0.00 | 754.94 | 16.39 | yes |
Hpgds | Hematopoietic prostaglandin D synthase | TRINITY_DN66544_c0_g1_i1 | 2050 | complete | 4.98 | 6.96E-3 | 107.45 | 26.71 | yes |
Cathepsin D | Cathepsin D | TRINITY_DN74459_c2_g2_i1 | 2138 | complete | 16.92 | 9.31E-8 | 2637.5 | 224.02 | yes |
Pxt | Chorion peroxidase-like | TRINITY_DN71711_c0_g1_i1 | 2419 | complete | 4872.33 | 0.00 | 2495.51 | 0.67 | yes |
Fem-1b | Protein fem-1 homolog B | TRINITY_DN63971_c0_g1_i2 | 3646 | complete | 2.65 | 6.87E-3 | 37.10 | 19.73 | no |
Profilin | Profilin | TRINITY_DN61540_c0_g3_i2 | 904 | complete | 38.02 | 0.00 | 1768.14 | 68.09 | yes |
FAOMeT | Farnesoic acid-O-methyl transferase | TRINITY_DN64401_c1_g5_i1 | 1726 | complete | 7.84 | 3.52E-6 | 841.08 | 154.89 | yes |
Hsc70 | Heat shock cognate 70 | TRINITY_DN71006_c1_g1_i1 | 2040 | 3′ partial | 3.64 | 4.79E-03 | 674.77 | 259.44 | no |
Dmc1 | Disrupted meiotic cDNA | TRINITY_DN62322_c4_g1_i1 | 1526 | complete | 5.30 | 9.59E-5 | 222.61 | 60.22 | yes |
Sox8 | Transcription factor SOX-8 | TRINITY_DN70088_c0_g1_i1 | 4022 | complete | 7.26 | 1.99E-3 | 3.57 | 0.58 | no |
Smad4 | Mothers against decapentaplegic 4 | TRINITY_DN62236_c4_g2_i4 | 3768 | complete | 24.67 | 0.00 | 97.11 | 4.91 | yes |
Gnrhr | Gonadotropin-releasing hormone receptor | TRINITY_DN64884_c0_g1_i3 | 2199 | complete | 2493.02 | 0.00 | 62.82 | 0.03 | yes |
Pges2 | Prostaglandin E synthase 2 | TRINITY_DN55480_c0_g1_i1 | 1590 | complete | 4.00 | 2.74E-4 | 51.2 | 18.82 | no |
Pgmrc1 | Progestin membrane receptor component 1 | TRINITY_DN74305_c2_g1_i3 | 1763 | complete | 3.17 | 9.65E-3 | 17.48 | 7.48 | no |