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Table 2 Transposable elements identified in Macrophomina phaseolina genomes from an isolate recovered from strawberry that represents the strawberry genotype (11–12) and an isolate recovered from alfalfa (Al-1) that represents another genotype

From: Assembly, annotation, and comparison of Macrophomina phaseolina isolates from strawberry and other hosts

Transposable Element Category

11–12

Al-1

DNA

490

398

LINE/Penelope

109

 

LINE/Tad1

269

179

LINE/CRE

1

 

LINE/L2

12

 

LINE (other)

189

158

LTR/Copia

550

385

LTR/Gypsy

1173

1522

LTR/ERV4

17

 

LTR (other)

59

43

RC/Helitron

13

15

  1. LINE Long interspersed nuclear element
  2. LTR Long terminal repeat
  3. RC Rolling circle