Table 1 Summary of the RNA-Seq Data
Sample | Before Filter Read Number | After Filter Read Number | GC (%) | Q20 (%) | Q30 (%) |
|---|---|---|---|---|---|
EI-1 | 50,744,342 | 49,382,978 | 55.90% | 95.85% | 90.31% |
EI-2 | 47,767,534 | 46,374,160 | 56.12% | 95.70% | 90.09% |
EI-3 | 63,212,086 | 61,335,446 | 55.75% | 95.68% | 90.07% |
EII-1 | 46,876,844 | 45,390,562 | 56.09% | 95.56% | 89.86% |
EII-2 | 60,658,428 | 58,791,718 | 56.70% | 95.61% | 89.94% |
EII-3 | 68,915,150 | 66,614,358 | 61.35% | 95.29% | 89.27% |
EIII-1 | 53,018,772 | 51,122,918 | 55.71% | 95.28% | 89.35% |
EIII-2 | 54,777,846 | 53,228,728 | 56.98% | 95.61% | 89.71% |
EIII-3 | 53,524,516 | 52,083,454 | 55.99% | 95.82% | 90.26% |