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Table 1 Number of predicted RGA candidates by encoding families of nucleotide-biding site followed by leucine-rich repeat (NBS-LRR) and transmembrane domain followed by LRR (TM-LRR) and their classes within each of the four targeted sugarcane references of this study

From: Genome survey of resistance gene analogs in sugarcane: genomic features and differential expression of the innate immune system from a smut-resistant genotype

RGA class

Reference

R570

AP85–441

S. bicolor

COMPGG

NBS-LRR encoding

47

137

139

109

CNL

22

154

135

140

TNL

0

0

0

0

TM-LRR encoding

 RLK

79

427

404

290

 RLP

60

157

100

154

Other variants

 TM-CC

313

450

482

307

 CN

21

36

21

64

 NBS-encoding

53

75

38

257

 LRR-encoding

336

635

389

998

 Other combinations

29

282

209

151

 Total number of RGAs

960

2354

1919

2470

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BMC Genomics

ISSN: 1471-2164

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