Table 5 Statistics of small RNA-Seq data and mapping
Library | Cleaned Reads | Q30 (%) | Mapped Reads | Ratio |
|---|---|---|---|---|
Stage 1–1 | 25,419,864 | 99.52 | 17,280,653 | 67.98% |
Stage 1–2 | 27,725,314 | 99.51 | 20,788,388 | 74.98% |
Stage 1–3 | 32,083,772 | 99.47 | 24,038,271 | 74.92% |
Stage 2–1 | 29,680,316 | 98.97 | 22,967,955 | 77.38% |
Stage 2–2 | 27,980,952 | 98.73 | 20,590,376 | 73.59% |
Stage 2–3 | 27,524,015 | 98.92 | 19,633,005 | 71.33% |
Stage 3–1 | 28,148,315 | 99.47 | 21,457,794 | 76.23% |
Stage 3–2 | 58,751,076 | 98.69 | 39,615,210 | 67.43% |
Stage 3–3 | 24,532,389 | 99.50 | 18,087,570 | 73.73% |
Total | 281,846,013 | – | 204,459,222 | 72.54% |