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Table 3 AUC of the ROC curve for PPI prediction on Yeast and Human datasets

From: GO2Vec: transforming GO terms and proteins to vector representations via graph embeddings

Model

Yeast

Human

Resnik

0.7942

0.7891

Lin

0.7354

0.7222

Jang&Conrath

0.7108

0.7027

simGIC

0.7634

0.7594

Onto2Vec

0.7660

0.7593

GO2Vec_mhd_go

0.8026

0.7953

GO2Vec_cos_goa

0.7824

0.7676

GO2Vec_mhd_goa

0.8154

0.8046

  1. The best result in each metric is highlighted in boldface
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BMC Genomics

ISSN: 1471-2164

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