Table 3 Comparative analysis between results of the proposed method and other studies on the independent test sets
From: iPseU-NCP: Identifying RNA pseudouridine sites using random forest and NCP-encoded features
Dataset | Model | ACC (%) | SN (%) | SP (%) | MCC | Method |
|---|---|---|---|---|---|---|
H_200 | iRNA-PseU | 61.50 | 58.00 | 65.00 | 0.23 | Chen et al., 2016 |
PseUI | 65.50 | 63.00 | 68.00 | 0.31 | He et al., 2018 | |
iPseU-CNN | 69.00 | 77.72 | 60.81 | 0.40 | Tahir et al., 2019 | |
iPseU-NCP | 74.00 | 70.00 | 78.00 | 0.48 | Ours | |
S_200 | iRNA-PseU | 60.00 | 63.00 | 57.00 | 0.20 | Chen et al., 2016 |
PseUI | 68.50 | 65.00 | 72.00 | 0.37 | He et al., 2018 | |
iPseU-CNN | 73.50 | 68.76 | 77.82 | 0.47 | Tahir et al., 2019 | |
iPseU-NCP | 75.00 | 73.00 | 77.00 | 0.50 | Ours |