Fig. 7From: Whole genome sequencing of Borrelia miyamotoi isolate Izh-4: reference for a complex bacterial genomea Phylogenetic tree of Borrelia species based on the concatenated alignment of nucleotide sequences of 249 core genes located on the chromosome. Borrelia miyamotoi clusters with relapsing fever species. b Phylogenetic tree of B miyamotoi strains based on concatenated alignment of nucleotide sequences of 719 core genes. A maximum likelihood tree was constructed using RAxML software using a nucleotide substitution model with a gamma distribution of variable positions (GTR + Γ). The resulting tree was midpoint rooted using Figtree (http://tree.bio.ed.ac.uk/software/figtree/). Long branches shown not according to scale are indicated by dashed lines. Scale bar indicates substitution ratesBack to article page