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Table 3 Gene content analysis of Izh-4 genome

From: Whole genome sequencing of Borrelia miyamotoi isolate Izh-4: reference for a complex bacterial genome

 

Length, bp

Total genes

Total CDS

COG classified genes

% of COG classified genes

Total number of pseudogenes

% pseudogenes of total genes

Pseudogenes frameshifted

Pseudogenes uncompleted

Pseudogenes with internal stop

chromosome

906,129

850

791

641

81

22

3

17

2

3

lp72

73,492

72

70

15

21

2

3

2

0

0

lp70

70,072

93

69

10

14

24

26

17

5

2

lp64

64,141

84

61

9

14

23

27

19

2

2

lp41

41,127

35

33

12

36

2

6

2

0

0

cp30–1

30,091

42

42

5

11

0

0

0

0

0

cp30–2

29,490

42

41

6

14

1

2

0

1

0

lp29

28,667

23

17

1

5

6

26

4

2

0

lp23

27,717

23

20

2

10

3

13

3

0

0

lp27

26,599

31

27

4

14

4

13

1

3

0

lp24

24,033

20

16

1

6

4

20

4

0

0

lp18–1

18,334

18

10

1

10

8

44

5

2

1

lp18–2

18,024

13

10

1

10

3

23

1

1

1

lp13

13,410

10

9

2

22

1

10

1

0

0

lp6

5851

6

6

1

16

0

0

0

0

0

Total:

 

1362

1222

711

 

103

    
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BMC Genomics

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