Fig. 2
From: Genomic dissection of the most prevalent Listeria monocytogenes clone, sequence type ST87, in China
Phylogenetic tree of the 71 ST87 strains. The tree was constructed using the maximum likelihood method based on core genome SNPs. The strains isolated from different regions were marked with different colors (red for Sichuan, blue for Beijing, green for Zhejiang, brown for Shanghai and blank for Fujian, Henan, Hubei and Jiangsu). The strains isolated from clinical cases were highlighted. The strains harbored the plasmid were labeled with a red solid dot. The corresponding putative prophage and the profile of spacers were shown alongside the dendrogram on the right