Table 1 Quality control of the clean reads data
From: Differential expression of microRNAs in tomato leaves treated with different light qualities
Sample | Raw reads | Clean reads | Raw clean reads % | Low quality % | Containing ‘N’ reads | Length < 18 | Lenghth> 30 | Q30% |
|---|---|---|---|---|---|---|---|---|
S01 | 27,670,941 | 23,487,978 | 84.88 | 0 | 0 | 2,173,796 | 2,009,167 | 98.46 |
S02 | 19,651,152 | 17,574,787 | 89.43 | 0 | 0 | 837,356 | 1,239,009 | 98.70 |
S03 | 20,232,654 | 17,595,200 | 86.96 | 0 | 0 | 1,104,045 | 1,533,409 | 98.67 |
S04 | 22,329,405 | 18,822,750 | 84.30 | 0 | 0 | 1,633,140 | 1,873,515 | 98.69 |
S05 | 25,943,329 | 22,307,050 | 85.98 | 0 | 0 | 1,236,511 | 2,399,768 | 98.51 |
S06 | 21,044,472 | 18,074,248 | 85.89 | 0 | 0 | 650,390 | 2,319,834 | 98.49 |