Table 1 Bacterial strains and genomes used in this study
Species | Strain | Year | Location | Reference | Accession ID |
|---|---|---|---|---|---|
V. alginolyticus | 062916C | 2016 | Oregon | This study* | VTYI00000000 |
V. alginolyticus | 081416A | 2016 | Oregon | This study* | VTYF00000000 |
V. alginolyticus | L22Y01 | 2015 | Washington | This study* | VTYJ00000000 |
V. anguillarum | 00–84-1 | 2000 | Washington | This study* | VTYO00000000 |
V. chagasii | 00–90-10 | 2000 | Hawaii | This study* | VTXW00000000 |
V. coralliilyticus | 071316B | 2016 | Oregon | This study* | VTYG00000000 |
V. coralliilyticus | 080116A | 2016 | Oregon | [28] | GCA_002286405 |
V. coralliilyticus | 081216C | 2016 | Oregon | This study* | VTYE00000000 |
V. coralliilyticus | 09–121-3 | Unknown | Unknown | This study* | VTXP00000000 |
V. coralliilyticus | 19,105 | 1965 | Conneticut | [22]* | VTXA00000000 |
V. coralliilyticus | AIC-5 | 2015 | New Jersey | This study* | VTXB00000000 |
V. coralliilyticus | AIC-7 | 2015 | New Jersey | [28] | GCA_002287625 |
V. coralliilyticus | BAA-450 | 1999 | Indian Ocean | [20] | ACZN00000000 |
V. coralliilyticus | C154 | 2017 | Washington | This study* | VTYL00000000 |
V. coralliilyticus | OCN014 | 2010 | Palmyra Atoll | [29] | GCA_000763535 |
V. coralliilyticus | RE22 | 2000 | Oregon | [23] | GCA_003391375.1 |
V. coralliilyticus | RE87 | 1999 | Hawaii | [11] | GCA_002286655 |
V. coralliilyticus | RE88 | 2000 | Hawaii | [11] | VTYQ00000000 |
V. coralliilyticus | RE90 | 2000 | Hawaii | [11] | VTYR00000000 |
V. coralliilyticus | RE98 | 2000 | Oregon | [23] | GCA_000772065.1 |
V. coralliilyticus | X00–12-4 | 2000 | Oregon | [23]* | VTYS00000000 |
V. crassostreae | 00–69-1 | 2000 | Washington | This study* | VTXY00000000 |
V. crassostreae | 99–79-Y | 1999 | Washington | [23]* | VTXZ00000000 |
V. cyclitrophicus | HMSC5 | 2000 | Oregon | [27] | VTYP00000000 |
V. cyclitrophicus | T6Y01 | 2015 | Washington | This study* | VTYK00000000 |
V. cyclitrophicus | 070116B | 2016 | Oregon | This study* | VTYB00000000 |
V. hepatarius | 070516A | 2016 | Oregon | This study* | VTYD00000000 |
V. jasicida | T3G01 | 2015 | Washington | This study* | VTXQ00000000 |
V. kanaloae | 06–86-2 | 2006 | Oregon | [30] | VTXR00000000 |
V. kanaloae | 073016A | 2016 | Oregon | This study* | VTXS00000000 |
V. mediterranei | 00–90-15 | 2000 | Hawaii | This study* | VTXV00000000 |
V. mediterranei | 71105 | Unknown | Florida | This study* | VTXU00000000 |
V. owensii | 00–18–3-1 | 2000 | Hawaii | This study* | VTXX00000000 |
V. rotiferianus | 00–78-3 | 2000 | Hawaii | This study* | VTYN00000000 |
V. rotiferianus | 01–65–5-4 | 2000 | Hawaii | This study* | VTXT00000000 |
Vibrio sp. | 070316B | 2016 | Oregon | This study* | VTYC00000000 |
V. pectenicida | 99–46-Y | 2000 | Washington | This study* | VTXC00000000 |
Vibrio sp. | 99–70-13A1 | 2000 | Oregon | This study* | VTXD00000000 |
Vibrio sp. | 99–8-1 | 1999 | Washington | This study* | VTXE00000000 |
Vibrio sp. | 99 K-1 | 2000 | Hawaii | This study* | VTXF00000000 |
Vibrio sp. | AIC-3 | 2016 | New Jersey | This study* | VTXG00000000 |
V. aestuarianus | O-00-16-10 | Unknown | Washington | This study* | VTXH00000000 |
Vibrio sp. | RE86 | 2000 | Hawaii | [11]* | VTXI00000000 |
V. splendidus | T3Y01 | 2015 | Washington | This study* | VTXJ00000000 |
V. splendidus | 07–146-1 | 2000 | California | This study* | VTXK00000000 |
V. splendidus | 99–70-13A3 | 2000 | Oregon | This study* | VTXL00000000 |
V. splendidus | 99–70-6B3 | 2000 | Oregon | This study* | VTXM00000000 |
V. splendidus | X00–12-3 | 2000 | Oregon | This study* | VTXN00000000 |
V. tubiashii | 01–65–5-1 | 2000 | Hawaii | This study* | VTXO00000000 |
V. tubiashii | 19106 | 1965 | Connecticut | [22] | GCA_000259295 |
V. tubiashii | 19109 | 1965 | Connecticut | [22] | GCA_000772105 |