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Table 4 The comparisons on accuracy with different sequencing error rates of L between QIHC and Canu

From: A hybrid correcting method considering heterozygous variations by a comprehensive probabilistic model

Heterozygous interval

[0.20,0.80]

   

[0.25,0.75]

Error rate of L

20%

15%

10%

5%

20%

15%

10%

5%

QIHC

0.920

0.868

0.882

0.882

0.902

0.850

0.862

0.870

Canu

0.868

0.852

0.864

0.866

0.846

0.796

0.802

0.836

Heterozygous interval

[0.30,0.70]

   

[0.35,0.65]

   

Error rate of L

20%

15%

10%

5%

20%

15%

10%

5%

QIHC

0.816

0.778

0.760

0.788

0.618

0.560

0.536

0.592

Canu

0.780

0.710

0.690

0.768

0.592

0.520

0.504

0.626

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BMC Genomics

ISSN: 1471-2164

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