Table 3 Results of mapping gDNA reads from 0B and 1(2)B of A. mexicanus, A. correntinus and A. flavolineata on transcriptome CDS. The higher Log2 ratio indicates the highly confident CDSs on B chromosome. See the complete list as Supplementary dataset file 3
Transcript ID | 0B reads | 1(2)B reads | 1(2)B/0B | Log2 ratio | Annotation |
|---|---|---|---|---|---|
A. mexicanus | |||||
 ARA0AAA105YI15EM1.b.am.1 | 277 | 1496 | 5.40072 | 2.43315 | tars |
 ARA0AAA15YI22EM1.b.am.1 | 44 | 569 | 12.9318 | 3.69285 | novel_gene |
 ARA0AAA117YG08EM1.b.am.1 | 51 | 145 | 2.84314 | 1.50749 | scn12aa |
 ARA0AAA12YF15EM1.b.am.1 | 251 | 968 | 3.85657 | 1.94732 | exosc7 |
 ARA0AAA15YI22EM1.b.am.1 | 44 | 569 | 12.9318 | 3.69285 | novel_gene |
 ARA0AAA6YO21EM1.b.am.1 | 255 | 816 | 3.2 | 1.67807 | novel_gene |
 ARA0AAA75YN07EM1.b.am.1 | 40 | 142 | 3.55 | 1.82782 | zgc |
 ARA0ABA106YI03EM1.b.am.1 | 48 | 165 | 3.4375 | 1.78136 | novel_gene |
 ARA0ABA11YM14EM1.b.am.1 | 61 | 224 | 3.67213 | 1.87662 | zgc |
 ARA0ABA21YO23EM1.b.am.1 | 90 | 271 | 3.01111 | 1.5903 | novel_gene |
 ARA0ABA22YA20EM1.b.am.1 | 57 | 200 | 3.50877 | 1.81097 | shisal1b |
 ARA0ABA3YF16EM1.b.am.1 | 49 | 178 | 3.63265 | 1.86102 | ndufa11 |
 ARA0ABA43YF05EM1.b.am.1 | 135 | 431 | 3.19259 | 1.67473 | pcdh1g31 |
 ARA0ABA65YL16EM1.b.am.1 | 64 | 189 | 2.95312 | 1.56224 | novel_gene |
 ARA0ABA73YP22EM1.b.am.1 | 76 | 224 | 2.94737 | 1.55943 | novel_gene |
 ARA0ABA93YE09EM1.b.am.1 | 48 | 168 | 3.5 | 1.80735 | novel_gene |
 ARA0AFA5YA16EM1.b.am.1 | 119 | 357 | 3 | 1.58496 | Gon4l |
A. correntinus | |||||
 ARA0AAA39YG16EM1.b.am.1 | 727 | 14,308 | 19.681 | 4.29873 | novel_gene |
 ARA0AAA40YD05EM1.b.am.1 | 156 | 517 | 3.314 | 1.72857 | jac3 |
 ARA0ABA10YE08EM1.b.am.1 | 586 | 1661 | 2.834 | 1.50284 | arih1l |
 ARA0ABA90YO24EM1.b.am.1 | 117 | 359 | 3.068 | 1.6173 | novel_gene |
 ARA0AFA5YA16EM1.b.am.1 | 96 | 301 | 3.135 | 1.64847 | gon4l |
 ARA0AHA14YK02EM1.b.am.1 | 50 | 151 | 3.02 | 1.59455 | unknown |
 ARA0AGA13YG24EM1.b.am.1 | 89 | 472 | 5.303 | 2.40681 | unknown |
 ARA0ABA7YH17EM1.b.am.1 | 44 | 140 | 3.182 | 1.66993 | unknown |
 ARA0ABA25YA20EM1.b.am.1 | 44 | 126 | 2.864 | 1.51803 | unknown |
 ARA0ABA107YI10EM1.b.am.1 | 42 | 119 | 2.833 | 1.50233 | unknown |
 ARA0ABA103YB02EM1.b.am.1 | 101 | 340 | 3.366 | 1.75104 | unknown |
 ARA0AAA70YD16EM1.b.am.1 | 71 | 318 | 4.479 | 2.16318 | unknown |
A. flavolineata | |||||
 GDIO01012001.1 | 68 | 208 | 3.059 | 1.61306 | Zpr1 |
 GDIO01012001.1 | 68 | 208 | 3.059 | 1.61306 | Zpr1 |
 GDIO01014672.1 | 75 | 298 | 3.973 | 1.99023 | Nipsnap |
 GDIO01044471.1 | 59 | 757 | 12.831 | 3.68156 | Ino80 |
 GDIO01045346.1 | 125 | 530 | 4.24 | 2.08406 | fz3 |
 GDIO01030872.1 | 69 | 491 | 7.116 | 2.83107 | unknown |
 GDIO01018848.1 | 42 | 200 | 4.762 | 2.25157 | unknown |
 GDIO01009316.1 | 145 | 611 | 4.214 | 2.07519 | unknown |