Skip to main content

Table 1 Distribution of BGC totals in 10 isolated strains (A) and percentages of BGCs encoded unknown compounds identified from genome sequence (B)

From: Antimicrobial activity screening of rhizosphere soil bacteria from tomato and genome-based analysis of their antimicrobial biosynthetic potential

A.

Strains

Predicted BGCs

NRPS

PKS

Hybrid NRPS/PKS

Terpene

Bacteriocin

Other

Bacillus cabrialesii BH5

12

4

1

1

2

3

1

Bacillus cabrialesii BH6

12

4

1

1

2

3

1

Bacillus subtilis DH12

12

4

1

1

2

3

1

Bacillus subtilis EH2

10

3

1

1

2

2

1

Bacillus subtilis EH5

11

3

1

1

2

3

1

Bacillus subtilis EH11

12

4

1

1

2

3

1

Bacillus endophyticus FH5

10

2

1

1

2

3

1

Bacillus velezensis FH17

15

5

4

1

2

1

2

Bacillus velezensis TH16

12

4

4

1

1

1

1

Paenibacillus sp. EDO6

14

3

2

2

1

4

1

B

BGC Types

Total BGCs

% Unknown

Known compounds

NRPSs

36

27.78

surfactin (8 BGCs), fengycin (8 BGCs), bacillibactin (10 BGCs)

PKSs

17

76.47

macrolactin (2 BGCs), difficidin (2 BGCs)

Hybrids

11

27.27

bacillaene (8 BGCs)

Bacteriocin

26

73.07

subtilin (2 BGCs), subtilosin A (6 BGCs)

Back to article page

BMC Genomics

ISSN: 1471-2164

Contact us