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Table 2 Gene ontology terms enriched for significantly upregulated proteins in Kashmiri and Jersey cattle

From: Comparative milk proteome analysis of Kashmiri and Jersey cattle identifies differential expression of key proteins involved in immune system regulation and milk quality

Functions

Description

GO term

No. of proteins

Protein IDs

Gene IDs

P-value

FDR

Kashmiri Cattle

 Molecular

Catalytic activity

GO:0003824

18

P19120, P12763, P30122, P11017, Q8MK44, P80209, P62871, Q8HXQ5, Q4GZT4, Q0IIG8, A5PK46, P00794, P80929, Q0VCZ8, Q2UVX4, P80025

HSPA8, AHSG, CEL, GNB2, DGAT1, CTSD, GNB1, ABCC1, ABCG2, RAB18, PNLIPRP2, CYM, ANG2, ACSL1, C3, LPO

0.0002

0.44

Antioxidant activity

GO:0016209

1

P80025

LPO

0.0843

0.79

 Cellular

Membrane

GO:0016020

4

P19120, P30122, Q8MK44, P80209, Q8HXQ5, Q4GZT4, Q0IIG8, P00794, P02702, P30932, P18892

HSPA8, CEL, DGAT1, CTSD, ABCC1, ABCG2, RAB18,CYM,FOLR1,CD9,BTN1A1

0.0198

0.181

Extracellular region

GO:0005576

10

P46201, P02666, P30122, C4PU73, Q9TTE1, P21214, P80025

Uterine milk protein, CSN2, CEL, Serin peptidase inhibitor,SERPINA3–1,TGFB2,LPO

0.00111

0.0354

Jersey Cattle

 Molecular

Reproduction

GO:0000003

2

A0A140T8A9, P11151, P02668, A5PK46

CSN3, LPL, CSN3,

0.005

0.422

Catalytic activity

GO:0003824

22

Q8HYJ9, Q5E9R3, P11151, Q5E9B1, Q8MK44,

P62998, Q2TBH2, Q8HXQ5, Q148J4, F1MN60,

P101, Q4GZT4, A5PK46, P00794, P80457, P02754,

P80025

FMO3, EHD1, LPL, LDHB, DGAT1, RAC1, RRAS, ABCC1, RAB2A, ATP2B2, ANG1, ABCG2, PNLIPRP2, CYM, XDH, LGB, LPO

0.066

0.83

Antioxidant activity

GO:0016209

1

P80025

LPO

0.087

0.52

 Cellular

Extracellular region

GO:0005576

11

P17697, A0A140T8A9, P34955, P46201, P02663,

Q3ZCH5, P41361, P28800, C4PU73,

P02662,P02668,P21214,P80025

CLU, CSN3, SERPINA1, Uterine milk protein, CSN1S2, AZGP1, SERPINC1, SERPINF2, Serin peptidase inhibitor, CSN1S1, CSN3, TGFB2, LPO

0

0

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BMC Genomics

ISSN: 1471-2164

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