Table 2 Predicted modular signaling proteins involved in c-di-GMP metabolism in all 24 analyzed M. aeruginosa genomes
From: Comparative genomics analysis of c-di-GMP metabolism and regulation in Microcystis aeruginosa
Strains | DGC (REC-GGDEF)a | PDE (DICT-HD-GYP) | PDE (EAL) | Hybrid protein (FHA-GGDEF-EAL) | DGC, PDE, Hybrid proteinb |
|---|---|---|---|---|---|
CHAOHU 1326 | WP_052276147.1 | WP_052275339.1 | – | WP_052277914.1 | 1, 1, 1 |
DIANCHI905 | – | WP_002746813.1 | – | WP_002743531.1 | 0, 1, 1 |
KW | WP_079210059.1 | WP_002796380.1 | – | WP_079210289.1 | 1, 1, 1 |
NaRes975 | – | WP_002752229.1 | – | WP_044034220.1 | 0, 1, 1 |
NIES44 | – | WP_045358386.1 | – | – | 0, 1, 0 |
NIES87 | – | WP_104396273.1 | – | WP_104397223.1 | 0, 1, 1 |
NIES88 | WP_061433230.1 | WP_061432432.1 | – | WP_061431785.1 | 1, 1, 1 |
NIES98 | – | WP_002752229.1 | – | WP_002739484.1 | 0, 1, 1 |
NIES843 | WP_012264732.1 | WP_002796380.1 | – | WP_012266621.1 | 1, 1, 1 |
NIES1211 | WP_039900524.1 | WP_039900517.1 | WP_071989022.1 | WP_110544382.1 | 1, 1, 1 |
NIES2481 | WP_046660716.1 | WP_066029831.1 | WP_080949698.1 | WP_066029445.1 | 1, 1, 1 |
NIES2549 | WP_046660716.1 | WP_046662116.1 | WP_080949698.1 | WP_046660636.1 | 1, 1, 1 |
PCC7806SL | – | WP_002746813.1 | – | WP_002743531.1 | 0, 1, 1 |
PCC7941 | – | WP_002752229.1 | – | WP_043997363.1 | 0, 1, 1 |
PCC9432 | – | WP_002752229.1 | – | WP_002750015.1 | 0, 1, 1 |
PCC9443 | WP_043996837.1 | WP_002765696.1 | – | WP_002768060.1 | 1, 1, 1 |
PCC9701 | WP_002801860.1 | WP_002803155.1 | – | WP_004163835.1 | 1, 1, 1 |
PCC9717 | WP_043999403.1 | WP_002762031.1 | – | WP_002761714.1 | 1, 1, 1 |
PCC9806 | WP_002783698.1 | WP_002780038.1 | – | WP_002783280.1 | 1, 1, 1 |
PCC9807 | WP_002787322.1 | WP_002785975.1 | – | WP_004161732.1 | 1, 1, 1 |
PCC9808 | – | WP_002752229.1 | – | WP_044034220.1 | 0, 1, 1 |
PCC9809 | WP_043999403.1 | WP_002796380.1 | – | WP_002797049.1 | 1, 1, 1 |
Sj | WP_110579156.1 | WP_110579081.1 | – | WP_110577728.1 | 1, 1, 1 |
TAIHU98 | – | WP_002733640.1 | – | WP_002739484.1 | 0, 1, 1 |