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Table 2 Peltaster fructicola nuclear genome statistics and comparison to other fungal species with highly compact genome

From: A chromosome-scale assembly of the smallest Dothideomycete genome reveals a unique genome compaction mechanism in filamentous fungi

Species

Peltaster fructicola

Taphrina deformans

Pneumocystis jirovecii

Saccharomyces cerevisiae

Chromosomes (count)

5

NAa

NAa

16

Genome size (Mb)

18.99

13.3

8.1

12.07

GC content (%)

51.95

49.5

29.1

38.3

Protein coding genes (count)

8072

5735

3898

6002

Exons per gene (count)

2.32

2.1

3.7

1.13

Introns per gene (count)

1.36

NAa

4.7b

0.06

tRNA genes (count)

44

169

71

275

rDNA copies (count)

9

1

5

~ 560b

Intergenic distance (median, bp)

463

NAa

326

350

Intergenic regions (%)

31

36

29

26

Intron distance (median, bp)

50

NAa

45

111

Telomere repeat unit

TAGGG

TTAGGG

TTAGGG

T(G)2–3(TG)1–6

Repeat content (%)

0.34

1.5

9.8

5.13

Data source

Current study

From reference [8]

From reference [8]

Analysis in this study. NCBI R64 genome version was used

  1. aNA, not applicable or not available from the website
  2. bThese data are obtained from reference [9]