Table 1 Basic information of CsARGs
Gene name | Accession number | ORF (bp) | AA | MW (kDa) | pI | instability index | Aliphatic index | Loc | SignalP | TMHs |
|---|---|---|---|---|---|---|---|---|---|---|
CsATG1c | XP_028071137.1 | 2193 | 730 | 80.78 | 6.69 | unstable | 83.37 | Nucleus | NO | NO |
CsATG1t | XM_028254805.1 | 852 | 283 | 31.70 | 6.72 | unstable | 100.21 | Cytoplasm | NO | NO |
CsATG2 | XM_028214951.1 | 6039 | 2012 | 220.59 | 5.69 | unstable | 87.78 | Nucleus | NO | NO |
CsATG3 | XM_028269562.1 | 945 | 314 | 35.72 | 4.72 | unstable | 78.82 | Cytoplasm | NO | NO |
CsATG4 | XM_028205167.1 | 1473 | 490 | 54.16 | 5.54 | unstable | 73.45 | Nucleus | NO | NO |
CsATG5 | XM_028239072.1 | 1047 | 367 | 41.29 | 4.77 | unstable | 98.26 | Cytoplasm | NO | NO |
CsATG6 | XM_028209545.1 | 1581 | 526 | 59.43 | 5.87 | unstable | 71.77 | Nucleus | NO | NO |
CsATG7 | XM_028207488.1 | 2121 | 706 | 77.95 | 5.63 | unstable | 91.20 | Cytoplasm | NO | NO |
CsATG8a | XM_028204481.1 | 354 | 117 | 13.65 | 6.60 | unstable | 84.19 | Cytoplasm | NO | NO |
CsATG8c | XM_028257959.1 | 360 | 119 | 13.65 | 8.78 | unstable | 83.61 | Nucleus | NO | NO |
CsATG8f | XM_028237334.1 | 369 | 122 | 14.00 | 8.75 | stable | 95.08 | Nucleus | NO | NO |
CsATG8g | XM_028213593.1 | 354 | 117 | 13.64 | 8.73 | stable | 86.67 | Nucleus | NO | NO |
CsATG8i | XM_028202806.1 | 393 | 130 | 14.96 | 7.58 | unstable | 64.38 | Nucleus | NO | NO |
CsATG9 | XM_028219288.1 | 2610 | 869 | 99.93 | 6.25 | unstable | 79.55 | plasmid | NO | 5 |
CsATG10 | XM_028214294.1 | 717 | 238 | 27.19 | 4.96 | unstable | 82.73 | Nucleus | NO | NO |
CsATG11 | XM_028237709.1 | 3471 | 1156 | 129.98 | 5.57 | unstable | 82.95 | Nucleus | NO | NO |
CsATG12 | XM_028206145.1 | 285 | 94 | 10.51 | 9.41 | unstable | 88.19 | Cytoplasm | NO | NO |
CsATG13 | XM_028260289.1 | 1863 | 620 | 68.75 | 8.90 | unstable | 65.27 | Nucleus | NO | NO |
CsATG14 | XM_028265144.1 | 1440 | 479 | 53.78 | 8.85 | unstable | 77.37 | Chloroplast | NO | NO |
CsATG16 | XM_028206301.1 | 1527 | 508 | 55.74 | 6.08 | unstable | 91.44 | Cytoplasm | NO | NO |
CsATG18a | XM_028253213.1 | 1296 | 431 | 47.63 | 6.62 | stable | 77.82 | Nucleus | NO | NO |
CsATG18b | XP_028071781.1 | 1107 | 368 | 40.18 | 7.15 | unstable | 96.49 | Cytoplasm | NO | 1 |
CsATG18c | XM_028196882.1 | 1257 | 418 | 46.36 | 8.01 | unstable | 84.40 | Chloroplast | NO | NO |
CsATG18f | XM_028238387.1 | 2697 | 898 | 97.13 | 8.47 | unstable | 75.46 | Mitochondria | NO | NO |
CsATG18g | XM_028202982.1 | 2988 | 995 | 108.70 | 5.78 | unstable | 80.87 | Chloroplast | NO | NO |
CsATG18h | XM_028252480.1 | 3069 | 1022 | 111.90 | 5.79 | unstable | 76.91 | Chloroplast | NO | NO |
CsATG20 | XM_028265532.1 | 1206 | 401 | 46.15 | 8.20 | unstable | 83.47 | Chloroplast | NO | NO |
CsATG101 | XM_028236970.1 | 657 | 218 | 25.43 | 6.46 | stable | 88.03 | Nucleus | NO | NO |
CsATI | XP_028079241.1 | 948 | 315 | 35.00 | 4.52 | unstable | 64.13 | Nucleus | NO | 1 |
CsVTI12 | CSA033576 | 669 | 222 | 25.26 | 9.22 | unstable | 105.81 | Nucleus | NO | 1 |
CsVTI13a | XM_028240825.1 | 666 | 221 | 25.12 | 9.30 | unstable | 102.81 | Cytoplasm | NO | 1 |
CsVTI13b | XM_028226760.1 | 666 | 221 | 24.89 | 9.41 | unstable | 101.95 | Cytoplasm | NO | 1 |
CsVPS15 | XM_028202873.1 | 4632 | 1543 | 172.13 | 6.19 | unstable | 87.43 | Nucleus | NO | NO |
CsVPS34 | XM_028243914.1 | 2361 | 814 | 93.36 | 6.39 | unstable | 92.46 | Cytoplasm | NO | NO |
CsTOR | XM_028205854.1 | 7410 | 2469 | 276.87 | 6.22 | unstable | 102.06 | Cytoplasm | NO | NO |